Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 AC018695.7-201ENST00000624587 2492 ntBASIC16.59■□□□□ 0.25
TUBA1AQ71U36 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 HEIH-201ENST00000623091 1652 ntBASIC16.59■□□□□ 0.25
TUBA1AQ71U36 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TUBA1AQ71U36 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 AP001094.4-201ENST00000579008 2176 ntBASIC16.58■□□□□ 0.25
TUBA1AQ71U36 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 PP12613-201ENST00000424958 2230 ntBASIC16.58■□□□□ 0.25
TUBA1AQ71U36 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 AC068418.2-201ENST00000577309 3703 ntBASIC16.58■□□□□ 0.25
TUBA1AQ71U36 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TUBA1AQ71U36 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 ECEL1P2-202ENST00000465689 757 ntBASIC16.58■□□□□ 0.24
TUBA1AQ71U36 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 FER1L4-210ENST00000615531 5998 ntBASIC16.58■□□□□ 0.24
TUBA1AQ71U36 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBA1AQ71U36 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.57■□□□□ 0.24
TUBA1AQ71U36 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms