Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 FKBP2-204ENST00000535135 639 ntTSL 322.58■■□□□ 1.215e-9■□□□□ 10.6
LARP4Q71RC2 AUP1-207ENST00000472800 663 ntTSL 418.45■□□□□ 0.545e-9■□□□□ 10.6
LARP4Q71RC2 FKBP2-205ENST00000536642 637 ntTSL 217.39■□□□□ 0.375e-9■□□□□ 10.6
LARP4Q71RC2 SRPRB-203ENST00000481356 1487 ntTSL 210.13□□□□□ -0.795e-9■□□□□ 10.6
LARP4Q71RC2 ZNF692-217ENST00000495731 461 ntTSL 325.19■■□□□ 1.624e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.54e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-203ENST00000412341 1916 ntTSL 522.44■■□□□ 1.184e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-208ENST00000470787 1544 ntTSL 221.68■■□□□ 1.064e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-225ENST00000533614 553 ntTSL 421.33■■□□□ 1.014e-8■□□□□ 10.6
LARP4Q71RC2 RB1CC1-208ENST00000521611 528 ntTSL 520.33■□□□□ 0.852e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-226ENST00000533647 548 ntTSL 320.3■□□□□ 0.844e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.764e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-220ENST00000496411 1064 ntTSL 319.3■□□□□ 0.684e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-212ENST00000478107 1051 ntTSL 518.73■□□□□ 0.594e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-219ENST00000496231 656 ntTSL 318.73■□□□□ 0.594e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.564e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-224ENST00000530986 595 ntTSL 418.36■□□□□ 0.534e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)18.12■□□□□ 0.492e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)17.9■□□□□ 0.464e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-218ENST00000496053 694 ntTSL 316.95■□□□□ 0.34e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-215ENST00000483791 681 ntTSL 316.76■□□□□ 0.274e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-221ENST00000497847 1031 ntTSL 216.76■□□□□ 0.274e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-222ENST00000528141 576 ntTSL 416.56■□□□□ 0.244e-8■□□□□ 10.6
LARP4Q71RC2 JPX-213ENST00000640437 1620 ntTSL 516.41■□□□□ 0.222e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-214ENST00000483223 901 ntTSL 316.28■□□□□ 0.24e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-223ENST00000530699 896 ntTSL 1 (best)15.98■□□□□ 0.154e-8■□□□□ 10.6
LARP4Q71RC2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.022e-8■□□□□ 10.6
LARP4Q71RC2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.012e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)14.62□□□□□ -0.074e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-201ENST00000323981 2540 ntTSL 213.88□□□□□ -0.192e-8■□□□□ 10.6
LARP4Q71RC2 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.292e-8■□□□□ 10.6
LARP4Q71RC2 ZNF692-230ENST00000534660 552 ntTSL 313.21□□□□□ -0.294e-8■□□□□ 10.6
LARP4Q71RC2 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC10.95□□□□□ -0.662e-8■□□□□ 10.6
LARP4Q71RC2 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.881e-8■□□□□ 10.6
LARP4Q71RC2 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.982e-8■□□□□ 10.6
LARP4Q71RC2 JPX-209ENST00000602920 625 ntTSL 28.79□□□□□ -12e-8■□□□□ 10.6
LARP4Q71RC2 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC8.48□□□□□ -1.052e-8■□□□□ 10.6
LARP4Q71RC2 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC7.93□□□□□ -1.142e-8■□□□□ 10.6
LARP4Q71RC2 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.77□□□□□ -1.172e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-204ENST00000525928 1710 ntTSL 27.68□□□□□ -1.182e-8■□□□□ 10.6
LARP4Q71RC2 CBX5-205ENST00000552562 675 ntTSL 47.5□□□□□ -1.212e-8■□□□□ 10.6
LARP4Q71RC2 GLO1-202ENST00000470973 1939 ntTSL 27.37□□□□□ -1.232e-8■□□□□ 10.6
LARP4Q71RC2 JPX-204ENST00000602294 502 ntTSL 27.25□□□□□ -1.252e-8■□□□□ 10.6
LARP4Q71RC2 JPX-211ENST00000602985 476 ntTSL 37.21□□□□□ -1.262e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-219ENST00000534079 656 ntTSL 27.1□□□□□ -1.272e-8■□□□□ 10.6
LARP4Q71RC2 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.73□□□□□ -1.332e-8■□□□□ 10.6
LARP4Q71RC2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.382e-8■□□□□ 10.6
LARP4Q71RC2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.412e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-213ENST00000529900 1066 ntTSL 26.2□□□□□ -1.422e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-210ENST00000529435 1011 ntTSL 56.19□□□□□ -1.422e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-222ENST00000546088 1728 ntTSL 35.95□□□□□ -1.462e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-215ENST00000530769 4358 ntTSL 25.6□□□□□ -1.512e-8■□□□□ 10.6
LARP4Q71RC2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.531e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-221ENST00000540232 483 ntTSL 35.47□□□□□ -1.532e-8■□□□□ 10.6
LARP4Q71RC2 CBX5-203ENST00000547872 745 ntTSL 25.36□□□□□ -1.552e-8■□□□□ 10.6
LARP4Q71RC2 TAF1D-202ENST00000393259 547 ntTSL 35.06□□□□□ -1.62e-8■□□□□ 10.6
LARP4Q71RC2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.762e-8■□□□□ 10.6
LARP4Q71RC2 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.942e-6■□□□□ 10.6
LARP4Q71RC2 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.54□□□□□ -1.042e-6■□□□□ 10.6
LARP4Q71RC2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.751e-47■□□□□ 10.6
LARP4Q71RC2 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC10.29□□□□□ -0.761e-47■□□□□ 10.6
LARP4Q71RC2 SET-202ENST00000372686 1029 ntTSL 25.01□□□□□ -1.611e-47■□□□□ 10.6
LARP4Q71RC2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.078e-10■□□□□ 10.6
LARP4Q71RC2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.64□□□□□ -0.078e-10■□□□□ 10.6
LARP4Q71RC2 CNN2-206ENST00000564572 2266 nt14.26□□□□□ -0.138e-10■□□□□ 10.6
LARP4Q71RC2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.95□□□□□ -0.188e-10■□□□□ 10.6
LARP4Q71RC2 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC11.59□□□□□ -0.558e-10■□□□□ 10.6
LARP4Q71RC2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.43e-9■□□□□ 10.6
LARP4Q71RC2 FKBP10-206ENST00000489591 2826 ntTSL 216.55■□□□□ 0.243e-9■□□□□ 10.6
LARP4Q71RC2 FKBP10-203ENST00000455106 1965 ntTSL 214.43□□□□□ -0.13e-9■□□□□ 10.6
LARP4Q71RC2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.05■■□□□ 1.762e-6■□□□□ 10.6
LARP4Q71RC2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.182e-6■□□□□ 10.6
LARP4Q71RC2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.931e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.921e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.921e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.491e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-217ENST00000476541 513 ntTSL 317.76■□□□□ 0.431e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-218ENST00000476727 1205 ntTSL 516.04■□□□□ 0.161e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.341e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.461e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.571e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.61e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.61e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)10.64□□□□□ -0.711e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-219ENST00000485001 596 ntTSL 310.6□□□□□ -0.711e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-213ENST00000471839 928 ntAPPRIS ALT2 TSL 28.95□□□□□ -0.981e-8■□□□□ 10.6
LARP4Q71RC2 CIZ1-212ENST00000471773 717 ntTSL 27.44□□□□□ -1.221e-8■□□□□ 10.6
LARP4Q71RC2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.564e-18■□□□□ 10.6
LARP4Q71RC2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.6■□□□□ 0.254e-18■□□□□ 10.6
LARP4Q71RC2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.214e-18■□□□□ 10.6
LARP4Q71RC2 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.97■□□□□ 0.154e-18■□□□□ 10.6
LARP4Q71RC2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.33■□□□□ 0.044e-18■□□□□ 10.6
LARP4Q71RC2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.98□□□□□ -0.014e-18■□□□□ 10.6
LARP4Q71RC2 HAMP-202ENST00000593580 2624 nt11.97□□□□□ -0.498e-8■□□□□ 10.6
LARP4Q71RC2 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.548e-8■□□□□ 10.6
LARP4Q71RC2 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.648e-8■□□□□ 10.6
LARP4Q71RC2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.76■■□□□ 1.552e-7■□□□□ 10.6
LARP4Q71RC2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.372e-7■□□□□ 10.6
LARP4Q71RC2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.04■■□□□ 1.122e-7■□□□□ 10.6
LARP4Q71RC2 AL136531.2-201ENST00000618770 1164 ntTSL 216.95■□□□□ 0.32e-7■□□□□ 10.6
Retrieved 100 of 15,922 protein–RNA pairs in 110.5 ms