Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 PRSS29P-201ENST00000440800 595 ntBASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 GPR89P-201ENST00000407924 1495 ntBASIC26.56■■□□□ 1.84
CCDC141Q6ZP82 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 VN2R19P-201ENST00000442399 1052 ntBASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 SIGLEC30P-201ENST00000455569 941 ntBASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 MIR4469-201ENST00000583919 79 ntBASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 AL078644.1-201ENST00000609881 752 ntBASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC141Q6ZP82 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 AC109462.3-201ENST00000573934 613 ntBASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC141Q6ZP82 AC009336.1-201ENST00000608941 1553 ntBASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC093677.2-201ENST00000600169 1863 ntBASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC254562.1-201ENST00000417586 456 ntBASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 MAL2-202ENST00000531508 892 ntTSL 3 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 PDPK2P-202ENST00000562415 1191 ntBASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC005829.1-201ENST00000570002 483 ntBASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 C20orf181-201ENST00000623918 480 ntBASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC141Q6ZP82 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 MKNK2P1-201ENST00000437526 628 ntBASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms