Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 AC023824.1-201ENST00000562945 2975 ntBASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 TSPY17P-201ENST00000450329 467 ntBASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 TSPY15P-201ENST00000457163 923 ntBASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 NAPSB-206ENST00000562112 1266 ntBASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 AC116562.4-202ENST00000641738 218 ntBASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM53Q6P2H8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 AC128688.1-201ENST00000487626 519 ntBASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 BX088651.1-201ENST00000540551 451 ntBASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 AC083906.6-201ENST00000641366 219 ntBASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM53Q6P2H8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 PCDHB19P-201ENST00000570871 2371 ntBASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms