Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 BASP1P1-201ENST00000430708 665 ntBASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 AC068137.2-201ENST00000605408 478 ntBASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 AC148477.5-201ENST00000625164 1645 ntBASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCRAQ6ISU1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 TSPY16P-201ENST00000449843 468 ntBASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 RN7SL204P-201ENST00000582831 262 ntBASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCRAQ6ISU1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 AC073130.3-201ENST00000624389 2278 ntBASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms