Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.56■■□□□ 1.2
USPL1Q5W0Q7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.56■■□□□ 1.2
USPL1Q5W0Q7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USPL1Q5W0Q7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USPL1Q5W0Q7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USPL1Q5W0Q7 AL020996.1-203ENST00000536896 2307 ntBASIC22.56■■□□□ 1.2
USPL1Q5W0Q7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AP006288.1-201ENST00000446065 395 ntBASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 KRT18P28-201ENST00000453838 1332 ntBASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.55■■□□□ 1.2
USPL1Q5W0Q7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 AC096633.1-201ENST00000422446 749 ntBASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 PRYP5-201ENST00000451909 266 ntBASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 AC136632.2-201ENST00000512891 861 ntBASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 PGM5P2-202ENST00000637225 1043 ntBASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USPL1Q5W0Q7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 SPDYE21P-201ENST00000413323 827 ntBASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 MCCD1P2-201ENST00000423228 335 ntBASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
USPL1Q5W0Q7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 SIGLEC16-201ENST00000599858 1437 ntBASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 AC122714.2-201ENST00000502787 707 ntBASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USPL1Q5W0Q7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms