Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 AC005498.2-205ENST00000593218 784 ntBASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 AC093028.1-201ENST00000622998 982 ntBASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 AC116562.4-201ENST00000641316 2276 ntBASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 AL805961.1-202ENST00000641562 540 ntBASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 AC018445.3-201ENST00000624177 1945 ntBASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13DQ5THJ4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 AC023141.5-201ENST00000458585 616 ntBASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
VPS13DQ5THJ4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 FAM58DP-201ENST00000428076 619 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 COX20P2-201ENST00000452636 358 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 CEND1P1-201ENST00000451006 455 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AC079781.4-201ENST00000641908 219 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AP002472.1-201ENST00000577490 586 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AL353135.1-201ENST00000606729 504 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AL353593.2-201ENST00000602529 1483 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms