Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 AL118508.1-201ENST00000613502 2345 ntBASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00242Q5T6M2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 LINC00304-203ENST00000565008 1864 ntBASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00242Q5T6M2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 AC132938.6-201ENST00000623828 1655 ntBASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 C1QBPP2-201ENST00000528754 825 ntBASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 AC006058.3-201ENST00000606217 1069 ntBASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00242Q5T6M2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 HLA-J-201ENST00000462773 1622 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms