Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 NUS1P3-201ENST00000423502 862 ntBASIC9.7□□□□□ -0.86
UBR4Q5T4S7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC069120.2-201ENST00000524091 540 ntBASIC9.7□□□□□ -0.86
UBR4Q5T4S7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC009477.1-201ENST00000452936 217 ntBASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC026120.1-201ENST00000611536 926 ntBASIC9.7□□□□□ -0.86
UBR4Q5T4S7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 RN7SL837P-201ENST00000463010 287 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 TMEM198B-204ENST00000484016 896 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 LINC01225-203ENST00000563550 1244 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 SPDYE11-202ENST00000450699 704 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 SPDYE9P-201ENST00000570642 692 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 SPDYE10P-202ENST00000612005 668 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 SPDYE8P-202ENST00000612377 668 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AC132938.5-201ENST00000624980 1813 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC9.69□□□□□ -0.86
UBR4Q5T4S7 MIR3615-201ENST00000581999 87 ntBASIC9.69□□□□□ -0.86
UBR4Q5T4S7 AL049796.1-201ENST00000565336 1766 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AC233280.19-201ENST00000633223 136 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 KRT8P47-201ENST00000604727 1398 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms