Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 AC012313.1-201ENST00000593393 3059 ntBASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 ANO7L1-203ENST00000602586 1720 ntBASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 FDX1P1-201ENST00000449115 551 ntBASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 AC096582.2-201ENST00000510860 516 ntBASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.45■□□□□ 0.38
SNAP47Q5SQN1 LINC00602-201ENST00000629776 2065 ntBASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 KRT16P4-201ENST00000453883 522 ntBASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNAP47Q5SQN1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AC079776.4-201ENST00000511039 504 ntBASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAP47Q5SQN1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms