Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC015911.4-201ENST00000588022 1070 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC022145.2-201ENST00000598203 171 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC008667.4-201ENST00000607370 168 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC138649.4-201ENST00000612222 287 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC092902.6-201ENST00000641783 218 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC068587.9-201ENST00000641814 219 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 MIR149-201ENST00000384879 89 ntBASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 AC096734.2-201ENST00000562054 433 ntBASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO4Q2I0M5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 RPS15P9-201ENST00000494093 319 ntBASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 CR383656.12-201ENST00000549567 513 ntBASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 LINC02560-201ENST00000596379 459 ntBASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 AC025580.3-201ENST00000617932 1424 ntBASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO4Q2I0M5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 AC010654.1-201ENST00000615722 808 ntBASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 AC008761.3-201ENST00000624803 892 ntBASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 LINC00602-201ENST00000629776 2065 ntBASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO4Q2I0M5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms