Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.71■□□□□ 0.75
KCNA1Q09470 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
KCNA1Q09470 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
KCNA1Q09470 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNA1Q09470 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
KCNA1Q09470 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KCNA1Q09470 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNA1Q09470 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 AC091607.1-201ENST00000490318 1060 ntBASIC19.7■□□□□ 0.74
KCNA1Q09470 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 AL121672.3-201ENST00000608644 468 ntBASIC19.7■□□□□ 0.74
KCNA1Q09470 AC091076.1-201ENST00000610741 619 ntBASIC19.7■□□□□ 0.74
KCNA1Q09470 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNA1Q09470 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KCNA1Q09470 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 AC006116.8-202ENST00000587620 1550 ntBASIC19.7■□□□□ 0.74
KCNA1Q09470 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
KCNA1Q09470 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA1Q09470 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNA1Q09470 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNA1Q09470 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNA1Q09470 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNA1Q09470 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KCNA1Q09470 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 TSSC2-201ENST00000450217 709 ntBASIC19.69■□□□□ 0.74
KCNA1Q09470 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KCNA1Q09470 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
KCNA1Q09470 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.69■□□□□ 0.74
KCNA1Q09470 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 IGHV3-41-201ENST00000613121 348 ntBASIC19.69■□□□□ 0.74
KCNA1Q09470 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.69■□□□□ 0.74
KCNA1Q09470 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNA1Q09470 AC009949.1-201ENST00000623048 1830 ntBASIC19.69■□□□□ 0.74
KCNA1Q09470 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNA1Q09470 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KCNA1Q09470 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
KCNA1Q09470 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA1Q09470 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
KCNA1Q09470 CHCHD2P8-201ENST00000429873 447 ntBASIC19.68■□□□□ 0.74
KCNA1Q09470 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNA1Q09470 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNA1Q09470 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.68■□□□□ 0.74
KCNA1Q09470 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNA1Q09470 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.68■□□□□ 0.74
KCNA1Q09470 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KCNA1Q09470 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNA1Q09470 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNA1Q09470 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA1Q09470 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNA1Q09470 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.67■□□□□ 0.74
KCNA1Q09470 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.67■□□□□ 0.74
KCNA1Q09470 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms