Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRPXP78539 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRPXP78539 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SRPXP78539 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRPXP78539 HLA-J-201ENST00000462773 1622 ntBASIC14.81□□□□□ -0.04
SRPXP78539 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SRPXP78539 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRPXP78539 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.8□□□□□ -0.04
SRPXP78539 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.8□□□□□ -0.04
SRPXP78539 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SRPXP78539 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 RPS2P4-201ENST00000476944 856 ntBASIC14.8□□□□□ -0.04
SRPXP78539 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.8□□□□□ -0.04
SRPXP78539 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.8□□□□□ -0.04
SRPXP78539 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.8□□□□□ -0.04
SRPXP78539 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SRPXP78539 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRPXP78539 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SRPXP78539 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SRPXP78539 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SRPXP78539 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SRPXP78539 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.79□□□□□ -0.04
SRPXP78539 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.79□□□□□ -0.04
SRPXP78539 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 AC124016.1-201ENST00000609552 612 ntBASIC14.79□□□□□ -0.04
SRPXP78539 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 AC116407.2-201ENST00000613639 860 ntBASIC14.79□□□□□ -0.04
SRPXP78539 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRPXP78539 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SRPXP78539 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.78□□□□□ -0.04
SRPXP78539 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.78□□□□□ -0.04
SRPXP78539 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.78□□□□□ -0.04
SRPXP78539 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SRPXP78539 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.78□□□□□ -0.04
SRPXP78539 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRPXP78539 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SRPXP78539 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms