Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.84■□□□□ 0.93
IRX3P78415 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.84■□□□□ 0.93
IRX3P78415 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.84■□□□□ 0.93
IRX3P78415 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.84■□□□□ 0.93
IRX3P78415 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.83■□□□□ 0.93
IRX3P78415 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
IRX3P78415 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
IRX3P78415 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
IRX3P78415 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IRX3P78415 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IRX3P78415 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IRX3P78415 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.83■□□□□ 0.93
IRX3P78415 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
IRX3P78415 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
IRX3P78415 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.83■□□□□ 0.93
IRX3P78415 AC092910.1-201ENST00000482027 1129 ntBASIC20.83■□□□□ 0.93
IRX3P78415 IGHV3-22-201ENST00000520721 359 ntBASIC20.83■□□□□ 0.93
IRX3P78415 AC145285.3-201ENST00000564603 959 ntBASIC20.83■□□□□ 0.93
IRX3P78415 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.83■□□□□ 0.93
IRX3P78415 AC027601.4-201ENST00000611259 610 ntBASIC20.83■□□□□ 0.93
IRX3P78415 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
IRX3P78415 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.83■□□□□ 0.93
IRX3P78415 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
IRX3P78415 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.83■□□□□ 0.92
IRX3P78415 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
IRX3P78415 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IRX3P78415 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IRX3P78415 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.83■□□□□ 0.92
IRX3P78415 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.83■□□□□ 0.92
IRX3P78415 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.83■□□□□ 0.92
IRX3P78415 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IRX3P78415 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.82■□□□□ 0.92
IRX3P78415 AC112698.1-201ENST00000510299 916 ntBASIC20.82■□□□□ 0.92
IRX3P78415 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.82■□□□□ 0.92
IRX3P78415 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.82■□□□□ 0.92
IRX3P78415 AL139288.1-201ENST00000623748 933 ntBASIC20.82■□□□□ 0.92
IRX3P78415 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
IRX3P78415 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.82■□□□□ 0.92
IRX3P78415 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.82■□□□□ 0.92
IRX3P78415 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
IRX3P78415 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.82■□□□□ 0.92
IRX3P78415 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
IRX3P78415 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.81■□□□□ 0.92
IRX3P78415 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.81■□□□□ 0.92
IRX3P78415 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.81■□□□□ 0.92
IRX3P78415 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
IRX3P78415 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.81■□□□□ 0.92
IRX3P78415 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
IRX3P78415 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
IRX3P78415 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.81■□□□□ 0.92
IRX3P78415 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
IRX3P78415 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
IRX3P78415 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 AC098831.1-202ENST00000438821 336 ntBASIC20.81■□□□□ 0.92
IRX3P78415 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
IRX3P78415 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.81■□□□□ 0.92
IRX3P78415 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
IRX3P78415 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IRX3P78415 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
IRX3P78415 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX3P78415 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 FAM220CP-201ENST00000395253 831 ntBASIC20.8■□□□□ 0.92
IRX3P78415 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX3P78415 MED15P5-201ENST00000423150 992 ntBASIC20.8■□□□□ 0.92
IRX3P78415 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.8■□□□□ 0.92
IRX3P78415 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.8■□□□□ 0.92
IRX3P78415 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms