Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
USP46P62068 LINC01711-201ENST00000598340 967 ntBASIC18.84■□□□□ 0.61
USP46P62068 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 AC106820.2-201ENST00000563775 3264 ntBASIC18.84■□□□□ 0.61
USP46P62068 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP46P62068 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
USP46P62068 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.84■□□□□ 0.61
USP46P62068 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
USP46P62068 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
USP46P62068 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP46P62068 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
USP46P62068 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP46P62068 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
USP46P62068 AC009078.2-202ENST00000463353 338 ntBASIC18.83■□□□□ 0.6
USP46P62068 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.83■□□□□ 0.6
USP46P62068 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.83■□□□□ 0.6
USP46P62068 AL591684.3-201ENST00000605187 298 ntBASIC18.83■□□□□ 0.6
USP46P62068 REXO1L6P-202ENST00000619970 1078 ntBASIC18.83■□□□□ 0.6
USP46P62068 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
USP46P62068 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.83■□□□□ 0.6
USP46P62068 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.83■□□□□ 0.6
USP46P62068 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.83■□□□□ 0.6
USP46P62068 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.83■□□□□ 0.6
USP46P62068 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
USP46P62068 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USP46P62068 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP46P62068 AL133373.2-201ENST00000623187 2828 ntBASIC18.82■□□□□ 0.6
USP46P62068 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.82■□□□□ 0.6
USP46P62068 FDX1P1-201ENST00000449115 551 ntBASIC18.82■□□□□ 0.6
USP46P62068 AF238378.1-201ENST00000526806 358 ntBASIC18.82■□□□□ 0.6
USP46P62068 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
USP46P62068 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.82■□□□□ 0.6
USP46P62068 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 AC009113.1-201ENST00000570267 2443 ntBASIC18.82■□□□□ 0.6
USP46P62068 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.82■□□□□ 0.6
USP46P62068 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
USP46P62068 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP46P62068 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.81■□□□□ 0.6
USP46P62068 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP46P62068 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP46P62068 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms