Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 AC135776.1-201ENST00000319817 2481 ntBASIC13.36□□□□□ -0.27
CMC4P56277 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.36□□□□□ -0.27
CMC4P56277 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CMC4P56277 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.36□□□□□ -0.27
CMC4P56277 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMC4P56277 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CMC4P56277 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CMC4P56277 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.35□□□□□ -0.27
CMC4P56277 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.35□□□□□ -0.27
CMC4P56277 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CMC4P56277 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.35□□□□□ -0.27
CMC4P56277 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CMC4P56277 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.35□□□□□ -0.27
CMC4P56277 AC012615.1-201ENST00000565797 1299 ntBASIC13.35□□□□□ -0.27
CMC4P56277 AP002414.4-201ENST00000589764 1148 ntBASIC13.35□□□□□ -0.27
CMC4P56277 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.35□□□□□ -0.27
CMC4P56277 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMC4P56277 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.35□□□□□ -0.27
CMC4P56277 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 KRT18P55-202ENST00000578578 1546 ntBASIC13.34□□□□□ -0.27
CMC4P56277 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CMC4P56277 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
CMC4P56277 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CMC4P56277 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CMC4P56277 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.34□□□□□ -0.27
CMC4P56277 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 DDX43P3-201ENST00000441064 443 ntBASIC13.34□□□□□ -0.27
CMC4P56277 MINOS1P3-201ENST00000457048 203 ntBASIC13.34□□□□□ -0.27
CMC4P56277 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.34□□□□□ -0.27
CMC4P56277 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 LINC01711-201ENST00000598340 967 ntBASIC13.34□□□□□ -0.27
CMC4P56277 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.34□□□□□ -0.27
CMC4P56277 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.34□□□□□ -0.27
CMC4P56277 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CMC4P56277 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.34□□□□□ -0.27
CMC4P56277 BICD1-207ENST00000551848 1962 ntBASIC13.34□□□□□ -0.27
CMC4P56277 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CMC4P56277 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms