Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.26■□□□□ 0.83
USP11P51784 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.26■□□□□ 0.83
USP11P51784 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.26■□□□□ 0.83
USP11P51784 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.26■□□□□ 0.83
USP11P51784 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP11P51784 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.25■□□□□ 0.83
USP11P51784 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
USP11P51784 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.25■□□□□ 0.83
USP11P51784 NOC2LP1-202ENST00000452600 2235 ntBASIC20.25■□□□□ 0.83
USP11P51784 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
USP11P51784 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.25■□□□□ 0.83
USP11P51784 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.25■□□□□ 0.83
USP11P51784 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.25■□□□□ 0.83
USP11P51784 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.25■□□□□ 0.83
USP11P51784 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.25■□□□□ 0.83
USP11P51784 AC099336.1-202ENST00000602961 463 ntBASIC20.25■□□□□ 0.83
USP11P51784 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.25■□□□□ 0.83
USP11P51784 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
USP11P51784 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP11P51784 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP11P51784 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP11P51784 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP11P51784 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
USP11P51784 DDX43P3-201ENST00000441064 443 ntBASIC20.24■□□□□ 0.83
USP11P51784 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.24■□□□□ 0.83
USP11P51784 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.24■□□□□ 0.83
USP11P51784 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
USP11P51784 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.24■□□□□ 0.83
USP11P51784 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.24■□□□□ 0.83
USP11P51784 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.24■□□□□ 0.83
USP11P51784 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.24■□□□□ 0.83
USP11P51784 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP11P51784 TP73-AS1-210ENST00000637775 1455 ntBASIC20.24■□□□□ 0.83
USP11P51784 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.23■□□□□ 0.83
USP11P51784 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.23■□□□□ 0.83
USP11P51784 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.23■□□□□ 0.83
USP11P51784 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.23■□□□□ 0.83
USP11P51784 TSPY19P-201ENST00000418461 509 ntBASIC20.23■□□□□ 0.83
USP11P51784 TSPY18P-201ENST00000441642 509 ntBASIC20.23■□□□□ 0.83
USP11P51784 KRT16P4-201ENST00000453883 522 ntBASIC20.23■□□□□ 0.83
USP11P51784 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.23■□□□□ 0.83
USP11P51784 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP11P51784 PRELID1P1-202ENST00000567272 903 ntBASIC20.23■□□□□ 0.83
USP11P51784 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.23■□□□□ 0.83
USP11P51784 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.23■□□□□ 0.83
USP11P51784 AC011467.2-201ENST00000598425 242 ntBASIC20.23■□□□□ 0.83
USP11P51784 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.23■□□□□ 0.83
USP11P51784 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms