Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF144AP50876 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RNF144AP50876 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF144AP50876 AC132938.6-201ENST00000623828 1655 ntBASIC16.71■□□□□ 0.27
RNF144AP50876 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF144AP50876 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF144AP50876 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RNF144AP50876 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RNF144AP50876 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF144AP50876 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.71■□□□□ 0.26
RNF144AP50876 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
RNF144AP50876 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF144AP50876 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF144AP50876 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RNF144AP50876 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 AL391807.1-203ENST00000604392 2365 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF144AP50876 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF144AP50876 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 TSPY5P-201ENST00000426936 936 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 SLC25A6P5-201ENST00000435663 894 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 AC034232.1-201ENST00000506026 1064 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF144AP50876 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.7■□□□□ 0.26
RNF144AP50876 MIR3180-4-201ENST00000582223 153 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF144AP50876 AL136038.4-201ENST00000603606 1261 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RNF144AP50876 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 AC093010.1-201ENST00000473625 1624 ntBASIC16.7■□□□□ 0.26
RNF144AP50876 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF144AP50876 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF144AP50876 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RNF144AP50876 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF144AP50876 AC100803.2-201ENST00000562459 1963 ntBASIC16.69■□□□□ 0.26
RNF144AP50876 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF144AP50876 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF144AP50876 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RNF144AP50876 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF144AP50876 RNF152P1-201ENST00000397754 604 ntBASIC16.69■□□□□ 0.26
RNF144AP50876 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF144AP50876 AC092647.4-201ENST00000457211 535 ntBASIC16.69■□□□□ 0.26
RNF144AP50876 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF144AP50876 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
RNF144AP50876 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF144AP50876 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF144AP50876 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF144AP50876 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RNF144AP50876 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF144AP50876 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF144AP50876 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF144AP50876 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RNF144AP50876 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms