Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A6P48664 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLC1A6P48664 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A6P48664 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC1A6P48664 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC1A6P48664 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC1A6P48664 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
SLC1A6P48664 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SLC1A6P48664 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A6P48664 CR769767.2-201ENST00000622735 460 ntBASIC17.66■□□□□ 0.42
SLC1A6P48664 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A6P48664 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A6P48664 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A6P48664 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A6P48664 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A6P48664 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A6P48664 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC1A6P48664 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 ID1-201ENST00000376105 1233 ntBASIC17.65■□□□□ 0.42
SLC1A6P48664 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC1A6P48664 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC1A6P48664 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC1A6P48664 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC1A6P48664 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 WWOX-216ENST00000569818 525 ntBASIC17.65■□□□□ 0.42
SLC1A6P48664 MIR3180-4-201ENST00000582223 153 ntBASIC17.65■□□□□ 0.42
SLC1A6P48664 FAM197Y4-202ENST00000622692 608 ntBASIC17.65■□□□□ 0.42
SLC1A6P48664 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A6P48664 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A6P48664 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A6P48664 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC1A6P48664 AL135905.2-201ENST00000584934 1404 ntBASIC17.64■□□□□ 0.42
SLC1A6P48664 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.64■□□□□ 0.42
SLC1A6P48664 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC1A6P48664 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC1A6P48664 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC1A6P48664 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 AP003041.3-201ENST00000527151 707 ntBASIC17.64■□□□□ 0.41
SLC1A6P48664 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SLC1A6P48664 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SLC1A6P48664 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 HLA-J-201ENST00000462773 1622 ntBASIC17.64■□□□□ 0.41
SLC1A6P48664 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC1A6P48664 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SLC1A6P48664 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A6P48664 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms