Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.03■□□□□ 0.8
HTTP42858 MIR6752-201ENST00000618442 71 ntBASIC20.03■□□□□ 0.8
HTTP42858 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.03■□□□□ 0.8
HTTP42858 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.03■□□□□ 0.8
HTTP42858 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.03■□□□□ 0.8
HTTP42858 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.03■□□□□ 0.8
HTTP42858 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HTTP42858 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
HTTP42858 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.03■□□□□ 0.8
HTTP42858 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.03■□□□□ 0.8
HTTP42858 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HTTP42858 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.03■□□□□ 0.8
HTTP42858 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.03■□□□□ 0.8
HTTP42858 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTTP42858 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.03■□□□□ 0.8
HTTP42858 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 INGX-202ENST00000489074 768 ntBASIC20.02■□□□□ 0.8
HTTP42858 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.02■□□□□ 0.8
HTTP42858 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HTTP42858 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.02■□□□□ 0.8
HTTP42858 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.02■□□□□ 0.8
HTTP42858 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HTTP42858 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.02■□□□□ 0.8
HTTP42858 AC096734.2-201ENST00000562054 433 ntBASIC20.02■□□□□ 0.8
HTTP42858 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.02■□□□□ 0.8
HTTP42858 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.02■□□□□ 0.8
HTTP42858 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTTP42858 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.02■□□□□ 0.79
HTTP42858 AC099522.2-201ENST00000607001 744 ntBASIC20.02■□□□□ 0.79
HTTP42858 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.02■□□□□ 0.79
HTTP42858 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HTTP42858 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.02■□□□□ 0.79
HTTP42858 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 FAM207CP-201ENST00000443486 507 ntBASIC20.01■□□□□ 0.79
HTTP42858 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.01■□□□□ 0.79
HTTP42858 CRB3P1-201ENST00000449338 276 ntBASIC20.01■□□□□ 0.79
HTTP42858 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.01■□□□□ 0.79
HTTP42858 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HTTP42858 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HTTP42858 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTTP42858 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HTTP42858 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20■□□□□ 0.79
HTTP42858 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20■□□□□ 0.79
HTTP42858 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20■□□□□ 0.79
HTTP42858 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20■□□□□ 0.79
HTTP42858 FAM58DP-201ENST00000428076 619 ntBASIC20■□□□□ 0.79
HTTP42858 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20■□□□□ 0.79
HTTP42858 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HTTP42858 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20■□□□□ 0.79
HTTP42858 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HTTP42858 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HTTP42858 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTTP42858 AC055876.3-201ENST00000431496 288 ntBASIC20■□□□□ 0.79
HTTP42858 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20■□□□□ 0.79
HTTP42858 CD63-210ENST00000550776 870 ntTSL 5 BASIC20■□□□□ 0.79
HTTP42858 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20■□□□□ 0.79
HTTP42858 AC138649.4-201ENST00000612222 287 ntBASIC20■□□□□ 0.79
HTTP42858 AC073592.5-201ENST00000624854 528 ntBASIC20■□□□□ 0.79
HTTP42858 AL161938.1-201ENST00000569833 2180 ntBASIC19.99■□□□□ 0.79
HTTP42858 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.99■□□□□ 0.79
HTTP42858 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.99■□□□□ 0.79
HTTP42858 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.99■□□□□ 0.79
HTTP42858 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTTP42858 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms