Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.65□□□□□ -0.06
CEACAM3P40198 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.65□□□□□ -0.06
CEACAM3P40198 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.65□□□□□ -0.06
CEACAM3P40198 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.65□□□□□ -0.06
CEACAM3P40198 TSPY22P-201ENST00000427496 604 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 KRT8P26-201ENST00000534154 1276 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.65□□□□□ -0.06
CEACAM3P40198 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 AC090616.6-201ENST00000582640 721 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CEACAM3P40198 AL390719.2-201ENST00000606993 987 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 AL121672.3-201ENST00000608644 468 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CEACAM3P40198 FLJ13224-201ENST00000313737 1514 ntBASIC14.65□□□□□ -0.06
CEACAM3P40198 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.65□□□□□ -0.06
CEACAM3P40198 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CEACAM3P40198 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.64□□□□□ -0.07
CEACAM3P40198 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
CEACAM3P40198 SPDYE13P-201ENST00000445314 798 ntBASIC14.64□□□□□ -0.07
CEACAM3P40198 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.64□□□□□ -0.07
CEACAM3P40198 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.64□□□□□ -0.07
CEACAM3P40198 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.64□□□□□ -0.07
CEACAM3P40198 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.64□□□□□ -0.07
CEACAM3P40198 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CEACAM3P40198 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CEACAM3P40198 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CEACAM3P40198 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CEACAM3P40198 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
CEACAM3P40198 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 REXO1L9P-201ENST00000604264 2108 ntBASIC14.63□□□□□ -0.07
CEACAM3P40198 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CEACAM3P40198 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CEACAM3P40198 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CEACAM3P40198 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.63□□□□□ -0.07
CEACAM3P40198 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.63□□□□□ -0.07
CEACAM3P40198 DUTP2-201ENST00000519164 463 ntBASIC14.63□□□□□ -0.07
CEACAM3P40198 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.63□□□□□ -0.07
CEACAM3P40198 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.63□□□□□ -0.07
CEACAM3P40198 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.63□□□□□ -0.07
CEACAM3P40198 AC116407.2-201ENST00000613639 860 ntBASIC14.63□□□□□ -0.07
CEACAM3P40198 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CEACAM3P40198 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CEACAM3P40198 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.63□□□□□ -0.07
CEACAM3P40198 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms