Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 HCG4B-203ENST00000450128 991 ntBASIC22.75■■□□□ 1.23
ATP6V1AP38606 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 AC148477.5-201ENST00000625164 1645 ntBASIC22.75■■□□□ 1.23
ATP6V1AP38606 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V1AP38606 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
ATP6V1AP38606 AC116562.4-201ENST00000641316 2276 ntBASIC22.74■■□□□ 1.23
ATP6V1AP38606 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 AL353593.2-201ENST00000602529 1483 ntBASIC22.73■■□□□ 1.23
ATP6V1AP38606 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 CNN2P11-201ENST00000429351 262 ntBASIC22.73■■□□□ 1.23
ATP6V1AP38606 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 AL078644.1-201ENST00000609881 752 ntBASIC22.73■■□□□ 1.23
ATP6V1AP38606 AC004790.2-201ENST00000623588 572 ntBASIC22.73■■□□□ 1.23
ATP6V1AP38606 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.73■■□□□ 1.23
ATP6V1AP38606 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V1AP38606 AC132938.5-201ENST00000624980 1813 ntBASIC22.73■■□□□ 1.23
ATP6V1AP38606 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.72■■□□□ 1.23
ATP6V1AP38606 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.72■■□□□ 1.23
ATP6V1AP38606 IGHV3-65-201ENST00000523210 341 ntBASIC22.72■■□□□ 1.23
ATP6V1AP38606 MIR3197-201ENST00000582241 73 ntBASIC22.72■■□□□ 1.23
ATP6V1AP38606 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP6V1AP38606 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
ATP6V1AP38606 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ATP6V1AP38606 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.72■■□□□ 1.23
ATP6V1AP38606 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V1AP38606 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.71■■□□□ 1.23
ATP6V1AP38606 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.71■■□□□ 1.23
ATP6V1AP38606 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 RPS15P9-201ENST00000494093 319 ntBASIC22.71■■□□□ 1.23
ATP6V1AP38606 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
ATP6V1AP38606 AC008667.4-201ENST00000607370 168 ntBASIC22.71■■□□□ 1.23
ATP6V1AP38606 NCF1C-201ENST00000438382 1427 ntBASIC22.71■■□□□ 1.23
ATP6V1AP38606 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
ATP6V1AP38606 GPR89P-201ENST00000407924 1495 ntBASIC22.71■■□□□ 1.23
ATP6V1AP38606 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V1AP38606 AL049757.1-201ENST00000616842 1596 ntBASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms