Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNCAP37840 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.8□□□□□ -0.04
SNCAP37840 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
SNCAP37840 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNCAP37840 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNCAP37840 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 RPS2P4-201ENST00000476944 856 ntBASIC14.8□□□□□ -0.04
SNCAP37840 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.8□□□□□ -0.04
SNCAP37840 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.8□□□□□ -0.04
SNCAP37840 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.8□□□□□ -0.04
SNCAP37840 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNCAP37840 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.8□□□□□ -0.04
SNCAP37840 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNCAP37840 UBALD1-205ENST00000590891 2641 ntBASIC14.79□□□□□ -0.04
SNCAP37840 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SNCAP37840 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 FLJ13224-201ENST00000313737 1514 ntBASIC14.79□□□□□ -0.04
SNCAP37840 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SNCAP37840 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.79□□□□□ -0.04
SNCAP37840 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SNCAP37840 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PCDH8P1-201ENST00000428983 2773 ntBASIC14.79□□□□□ -0.04
SNCAP37840 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SNCAP37840 FAM207BP-201ENST00000447172 505 ntBASIC14.79□□□□□ -0.04
SNCAP37840 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.79□□□□□ -0.04
SNCAP37840 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 CKBP1-201ENST00000565489 1086 ntBASIC14.79□□□□□ -0.04
SNCAP37840 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 LINC00602-201ENST00000629776 2065 ntBASIC14.79□□□□□ -0.04
SNCAP37840 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 AC073648.6-201ENST00000641589 218 ntBASIC14.79□□□□□ -0.04
SNCAP37840 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SNCAP37840 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNCAP37840 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.78□□□□□ -0.04
SNCAP37840 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.78□□□□□ -0.04
SNCAP37840 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.78□□□□□ -0.04
SNCAP37840 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
SNCAP37840 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.78□□□□□ -0.04
SNCAP37840 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms