Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTNNA1P35221 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNNA1P35221 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNNA1P35221 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNNA1P35221 SNORA78-201ENST00000459373 127 ntBASIC18.96■□□□□ 0.63
CTNNA1P35221 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNNA1P35221 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.96■□□□□ 0.63
CTNNA1P35221 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNNA1P35221 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CTNNA1P35221 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 PP12613-201ENST00000424958 2230 ntBASIC18.96■□□□□ 0.63
CTNNA1P35221 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNNA1P35221 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.62
CTNNA1P35221 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CTNNA1P35221 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CTNNA1P35221 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.95■□□□□ 0.62
CTNNA1P35221 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CTNNA1P35221 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNNA1P35221 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.94■□□□□ 0.62
CTNNA1P35221 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.94■□□□□ 0.62
CTNNA1P35221 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.94■□□□□ 0.62
CTNNA1P35221 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.94■□□□□ 0.62
CTNNA1P35221 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTNNA1P35221 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTNNA1P35221 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 AD000864.1-201ENST00000624076 2295 ntBASIC18.94■□□□□ 0.62
CTNNA1P35221 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNNA1P35221 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CTNNA1P35221 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms