Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC6A4P31645 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC6A4P31645 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A4P31645 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 AL354751.1-201ENST00000412768 1863 ntBASIC18.38■□□□□ 0.53
SLC6A4P31645 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SLC6A4P31645 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 AC096633.1-201ENST00000422446 749 ntBASIC18.38■□□□□ 0.53
SLC6A4P31645 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC6A4P31645 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SLC6A4P31645 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.38■□□□□ 0.53
SLC6A4P31645 LINC01711-201ENST00000598340 967 ntBASIC18.38■□□□□ 0.53
SLC6A4P31645 REXO1L6P-202ENST00000619970 1078 ntBASIC18.38■□□□□ 0.53
SLC6A4P31645 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 AC097374.2-201ENST00000618617 1306 ntBASIC18.38■□□□□ 0.53
SLC6A4P31645 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A4P31645 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC6A4P31645 AC135050.7-201ENST00000624508 2218 ntBASIC18.38■□□□□ 0.53
SLC6A4P31645 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A4P31645 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A4P31645 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 AC132008.2-207ENST00000454517 770 ntBASIC18.37■□□□□ 0.53
SLC6A4P31645 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A4P31645 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A4P31645 AL031008.1-201ENST00000619963 541 ntBASIC18.37■□□□□ 0.53
SLC6A4P31645 NEFHP1-201ENST00000412845 2629 ntBASIC18.37■□□□□ 0.53
SLC6A4P31645 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A4P31645 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.37■□□□□ 0.53
SLC6A4P31645 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC6A4P31645 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A4P31645 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC6A4P31645 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A4P31645 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A4P31645 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SLC6A4P31645 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A4P31645 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 FLJ13224-201ENST00000313737 1514 ntBASIC18.36■□□□□ 0.53
SLC6A4P31645 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A4P31645 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms