Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VARSP26640 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.66■□□□□ 0.42
VARSP26640 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 PCED1CP-201ENST00000419887 785 ntBASIC17.66■□□□□ 0.42
VARSP26640 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 TPM4P1-201ENST00000436100 807 ntBASIC17.66■□□□□ 0.42
VARSP26640 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.66■□□□□ 0.42
VARSP26640 MIR3180-4-201ENST00000582223 153 ntBASIC17.66■□□□□ 0.42
VARSP26640 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.66■□□□□ 0.42
VARSP26640 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.66■□□□□ 0.42
VARSP26640 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 AL157888.1-201ENST00000631930 593 ntBASIC17.66■□□□□ 0.42
VARSP26640 GNAS-203ENST00000306120 1878 ntBASIC17.66■□□□□ 0.42
VARSP26640 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.66■□□□□ 0.42
VARSP26640 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
VARSP26640 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
VARSP26640 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
VARSP26640 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
VARSP26640 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VARSP26640 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.66■□□□□ 0.42
VARSP26640 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARSP26640 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.65■□□□□ 0.42
VARSP26640 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VARSP26640 LINC01126-201ENST00000623515 1646 ntBASIC17.65■□□□□ 0.42
VARSP26640 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VARSP26640 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.65■□□□□ 0.42
VARSP26640 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.65■□□□□ 0.42
VARSP26640 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.65■□□□□ 0.42
VARSP26640 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
VARSP26640 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.65■□□□□ 0.42
VARSP26640 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.65■□□□□ 0.42
VARSP26640 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.65■□□□□ 0.42
VARSP26640 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
VARSP26640 AL441883.1-201ENST00000566170 1045 ntBASIC17.65■□□□□ 0.42
VARSP26640 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.65■□□□□ 0.42
VARSP26640 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.65■□□□□ 0.42
VARSP26640 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.65■□□□□ 0.42
VARSP26640 AC012183.1-201ENST00000625197 499 ntBASIC17.65■□□□□ 0.42
VARSP26640 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 PHGDH-209ENST00000641074 1780 ntBASIC17.65■□□□□ 0.42
VARSP26640 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VARSP26640 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VARSP26640 IER3-202ENST00000376377 1350 ntBASIC17.65■□□□□ 0.42
VARSP26640 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARSP26640 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARSP26640 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARSP26640 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARSP26640 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARSP26640 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.64■□□□□ 0.42
VARSP26640 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
VARSP26640 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARSP26640 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.64■□□□□ 0.42
VARSP26640 AC134043.2-201ENST00000624206 2238 ntBASIC17.64■□□□□ 0.42
VARSP26640 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
VARSP26640 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VARSP26640 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VARSP26640 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
VARSP26640 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
VARSP26640 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VARSP26640 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.64■□□□□ 0.41
VARSP26640 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VARSP26640 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.64■□□□□ 0.41
VARSP26640 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
VARSP26640 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.64■□□□□ 0.41
VARSP26640 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.64■□□□□ 0.41
VARSP26640 AC009065.1-201ENST00000564055 1225 ntBASIC17.64■□□□□ 0.41
VARSP26640 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms