Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN3P26045 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN3P26045 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN3P26045 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PTPN3P26045 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN3P26045 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 KRT8P47-201ENST00000604727 1398 ntBASIC18.3■□□□□ 0.52
PTPN3P26045 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN3P26045 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN3P26045 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PTPN3P26045 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN3P26045 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN3P26045 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 LINC01238-205ENST00000567549 1107 ntBASIC18.3■□□□□ 0.52
PTPN3P26045 AL390719.2-201ENST00000606993 987 ntBASIC18.3■□□□□ 0.52
PTPN3P26045 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN3P26045 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PTPN3P26045 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN3P26045 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN3P26045 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN3P26045 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN3P26045 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN3P26045 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN3P26045 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN3P26045 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN3P26045 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PTPN3P26045 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PTPN3P26045 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN3P26045 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN3P26045 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PTPN3P26045 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPN3P26045 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PTPN3P26045 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN3P26045 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN3P26045 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN3P26045 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PTPN3P26045 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN3P26045 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PTPN3P26045 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN3P26045 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN3P26045 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PTPN3P26045 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms