Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCND1P24385 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCND1P24385 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.09■□□□□ 0.49
CCND1P24385 AC008556.1-201ENST00000610908 2040 ntBASIC18.09■□□□□ 0.49
CCND1P24385 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCND1P24385 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCND1P24385 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.09■□□□□ 0.49
CCND1P24385 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.08■□□□□ 0.49
CCND1P24385 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.08■□□□□ 0.49
CCND1P24385 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCND1P24385 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCND1P24385 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCND1P24385 AC112777.1-201ENST00000540175 1423 ntBASIC18.08■□□□□ 0.49
CCND1P24385 KRT8P9-201ENST00000558927 1449 ntBASIC18.08■□□□□ 0.49
CCND1P24385 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.49
CCND1P24385 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 MIR564-202ENST00000385049 94 ntBASIC18.08■□□□□ 0.48
CCND1P24385 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.08■□□□□ 0.48
CCND1P24385 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.08■□□□□ 0.48
CCND1P24385 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.08■□□□□ 0.48
CCND1P24385 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.08■□□□□ 0.48
CCND1P24385 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.08■□□□□ 0.48
CCND1P24385 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCND1P24385 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CCND1P24385 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.08■□□□□ 0.48
CCND1P24385 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCND1P24385 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
CCND1P24385 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCND1P24385 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 AP001094.4-201ENST00000579008 2176 ntBASIC18.07■□□□□ 0.48
CCND1P24385 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 KRT18P22-201ENST00000402024 1347 ntBASIC18.07■□□□□ 0.48
CCND1P24385 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.07■□□□□ 0.48
CCND1P24385 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.07■□□□□ 0.48
CCND1P24385 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.07■□□□□ 0.48
CCND1P24385 KRT18P41-201ENST00000518924 1277 ntBASIC18.07■□□□□ 0.48
CCND1P24385 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 WWOX-216ENST00000569818 525 ntBASIC18.07■□□□□ 0.48
CCND1P24385 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 AC073912.3-201ENST00000624414 853 ntBASIC18.07■□□□□ 0.48
CCND1P24385 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.07■□□□□ 0.48
CCND1P24385 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 AC034236.2-201ENST00000606662 1610 ntBASIC18.07■□□□□ 0.48
CCND1P24385 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCND1P24385 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCND1P24385 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCND1P24385 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCND1P24385 AL513477.1-201ENST00000602865 2407 ntBASIC18.07■□□□□ 0.48
CCND1P24385 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCND1P24385 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCND1P24385 KRT8P45-201ENST00000414328 1447 ntBASIC18.06■□□□□ 0.48
CCND1P24385 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
CCND1P24385 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCND1P24385 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 LINC01568-207ENST00000641790 1380 ntBASIC18.06■□□□□ 0.48
CCND1P24385 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCND1P24385 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 MST1L-201ENST00000442552 2185 ntBASIC18.06■□□□□ 0.48
CCND1P24385 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms