Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CHCHD2P8-201ENST00000429873 447 ntBASIC17.59■□□□□ 0.41
CDH3P22223 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH3P22223 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH3P22223 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH3P22223 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.59■□□□□ 0.41
CDH3P22223 AC008687.5-201ENST00000593746 558 ntBASIC17.59■□□□□ 0.41
CDH3P22223 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH3P22223 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH3P22223 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH3P22223 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDH3P22223 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH3P22223 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH3P22223 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH3P22223 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CDH3P22223 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.58■□□□□ 0.41
CDH3P22223 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH3P22223 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.41
CDH3P22223 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH3P22223 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH3P22223 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.58■□□□□ 0.41
CDH3P22223 KRT89P-201ENST00000620027 1478 ntBASIC17.58■□□□□ 0.41
CDH3P22223 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDH3P22223 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDH3P22223 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH3P22223 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH3P22223 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.58■□□□□ 0.4
CDH3P22223 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH3P22223 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH3P22223 AL390719.2-201ENST00000606993 987 ntBASIC17.58■□□□□ 0.4
CDH3P22223 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH3P22223 AC141586.5-201ENST00000624546 2050 ntBASIC17.58■□□□□ 0.4
CDH3P22223 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH3P22223 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH3P22223 SDHAP2-201ENST00000455183 2001 ntBASIC17.58■□□□□ 0.4
CDH3P22223 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 AL031598.1-201ENST00000561511 1773 ntBASIC17.58■□□□□ 0.4
CDH3P22223 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH3P22223 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH3P22223 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CDH3P22223 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CDH3P22223 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH3P22223 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDH3P22223 KRT18P1-202ENST00000452408 1331 ntBASIC17.57■□□□□ 0.4
CDH3P22223 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH3P22223 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.57■□□□□ 0.4
CDH3P22223 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH3P22223 AC092329.2-201ENST00000598402 547 ntBASIC17.57■□□□□ 0.4
CDH3P22223 NPAP1P7-201ENST00000613027 823 ntBASIC17.57■□□□□ 0.4
CDH3P22223 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH3P22223 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDH3P22223 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH3P22223 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH3P22223 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH3P22223 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH3P22223 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH3P22223 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH3P22223 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH3P22223 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH3P22223 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.56■□□□□ 0.4
CDH3P22223 AP002414.4-201ENST00000589764 1148 ntBASIC17.56■□□□□ 0.4
CDH3P22223 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH3P22223 IGHV3-41-201ENST00000613121 348 ntBASIC17.56■□□□□ 0.4
CDH3P22223 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH3P22223 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH3P22223 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms