Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.78□□□□□ -0.2
RAB4AP20338 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RAB4AP20338 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.78□□□□□ -0.2
RAB4AP20338 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RAB4AP20338 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 AC100803.2-201ENST00000562459 1963 ntBASIC13.78□□□□□ -0.2
RAB4AP20338 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 AL161772.1-201ENST00000610494 4412 ntBASIC13.78□□□□□ -0.2
RAB4AP20338 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
RAB4AP20338 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB4AP20338 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB4AP20338 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
RAB4AP20338 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RAB4AP20338 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
RAB4AP20338 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RAB4AP20338 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RAB4AP20338 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
RAB4AP20338 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
RAB4AP20338 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB4AP20338 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 KRT8P8-201ENST00000434750 1448 ntBASIC13.77□□□□□ -0.21
RAB4AP20338 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB4AP20338 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.77□□□□□ -0.21
RAB4AP20338 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 AC068338.2-201ENST00000563278 1430 ntBASIC13.77□□□□□ -0.21
RAB4AP20338 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.77□□□□□ -0.21
RAB4AP20338 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
RAB4AP20338 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB4AP20338 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB4AP20338 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RAB4AP20338 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RAB4AP20338 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB4AP20338 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms