Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC022616.7-201ENST00000525383 220 ntBASIC20.69■□□□□ 0.9
ATP2B1P20020 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP2B1P20020 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP2B1P20020 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP2B1P20020 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.69■□□□□ 0.9
ATP2B1P20020 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
ATP2B1P20020 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP2B1P20020 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ATP2B1P20020 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2B1P20020 PCDHB18P-201ENST00000524813 2368 ntBASIC20.68■□□□□ 0.9
ATP2B1P20020 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2B1P20020 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
ATP2B1P20020 MIR1224-201ENST00000408193 85 ntBASIC20.68■□□□□ 0.9
ATP2B1P20020 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2B1P20020 HLA-F-220ENST00000434407 884 ntBASIC20.68■□□□□ 0.9
ATP2B1P20020 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2B1P20020 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2B1P20020 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.68■□□□□ 0.9
ATP2B1P20020 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2B1P20020 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2B1P20020 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
ATP2B1P20020 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2B1P20020 LINC01311-201ENST00000565162 1445 ntBASIC20.68■□□□□ 0.9
ATP2B1P20020 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATP2B1P20020 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ATP2B1P20020 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATP2B1P20020 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2B1P20020 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ATP2B1P20020 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
ATP2B1P20020 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
ATP2B1P20020 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP2B1P20020 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 HBZP1-201ENST00000354915 429 ntBASIC20.67■□□□□ 0.9
ATP2B1P20020 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.67■□□□□ 0.9
ATP2B1P20020 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2B1P20020 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 VENTXP5-201ENST00000523979 775 ntBASIC20.67■□□□□ 0.9
ATP2B1P20020 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP2B1P20020 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2B1P20020 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 HYMAI.1-201ENST00000620949 238 ntBASIC20.67■□□□□ 0.9
ATP2B1P20020 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2B1P20020 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 AC012317.2-201ENST00000623305 2251 ntBASIC20.67■□□□□ 0.9
ATP2B1P20020 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATP2B1P20020 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2B1P20020 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2B1P20020 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ATP2B1P20020 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2B1P20020 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP2B1P20020 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP2B1P20020 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2B1P20020 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms