Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.27■□□□□ 0.52
NFKB1P19838 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.27■□□□□ 0.52
NFKB1P19838 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.27■□□□□ 0.52
NFKB1P19838 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.27■□□□□ 0.52
NFKB1P19838 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NFKB1P19838 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NFKB1P19838 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NFKB1P19838 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NFKB1P19838 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.27■□□□□ 0.51
NFKB1P19838 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NFKB1P19838 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NFKB1P19838 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NFKB1P19838 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.27■□□□□ 0.51
NFKB1P19838 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NFKB1P19838 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.26■□□□□ 0.51
NFKB1P19838 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.26■□□□□ 0.51
NFKB1P19838 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NFKB1P19838 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.26■□□□□ 0.51
NFKB1P19838 TSPY12P-201ENST00000421279 868 ntBASIC18.26■□□□□ 0.51
NFKB1P19838 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.26■□□□□ 0.51
NFKB1P19838 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.26■□□□□ 0.51
NFKB1P19838 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.26■□□□□ 0.51
NFKB1P19838 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NFKB1P19838 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.26■□□□□ 0.51
NFKB1P19838 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NFKB1P19838 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
NFKB1P19838 AL353692.3-201ENST00000407031 1396 ntBASIC18.26■□□□□ 0.51
NFKB1P19838 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NFKB1P19838 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NFKB1P19838 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NFKB1P19838 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFKB1P19838 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.25■□□□□ 0.51
NFKB1P19838 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.25■□□□□ 0.51
NFKB1P19838 LINC00896-202ENST00000609602 2128 ntBASIC18.25■□□□□ 0.51
NFKB1P19838 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.25■□□□□ 0.51
NFKB1P19838 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.25■□□□□ 0.51
NFKB1P19838 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.25■□□□□ 0.51
NFKB1P19838 AC005332.3-201ENST00000589904 676 ntBASIC18.25■□□□□ 0.51
NFKB1P19838 AC009154.2-201ENST00000621177 724 ntBASIC18.25■□□□□ 0.51
NFKB1P19838 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.25■□□□□ 0.51
NFKB1P19838 KRT8P47-201ENST00000604727 1398 ntBASIC18.25■□□□□ 0.51
NFKB1P19838 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.25■□□□□ 0.51
NFKB1P19838 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.25■□□□□ 0.51
NFKB1P19838 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NFKB1P19838 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NFKB1P19838 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NFKB1P19838 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.24■□□□□ 0.51
NFKB1P19838 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NFKB1P19838 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.24■□□□□ 0.51
NFKB1P19838 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.24■□□□□ 0.51
NFKB1P19838 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.24■□□□□ 0.51
NFKB1P19838 AL390719.2-201ENST00000606993 987 ntBASIC18.24■□□□□ 0.51
NFKB1P19838 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.24■□□□□ 0.51
NFKB1P19838 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
NFKB1P19838 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms