Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 PRYP5-201ENST00000451909 266 ntBASIC20.25■□□□□ 0.83
COL11A1P12107 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 AC002347.1-201ENST00000569543 541 ntBASIC20.25■□□□□ 0.83
COL11A1P12107 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.25■□□□□ 0.83
COL11A1P12107 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
COL11A1P12107 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL11A1P12107 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.25■□□□□ 0.83
COL11A1P12107 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL11A1P12107 GPX1P2-201ENST00000429271 606 ntBASIC20.25■□□□□ 0.83
COL11A1P12107 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.25■□□□□ 0.83
COL11A1P12107 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.25■□□□□ 0.83
COL11A1P12107 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 DUTP2-201ENST00000519164 463 ntBASIC20.24■□□□□ 0.83
COL11A1P12107 PGM5P2-202ENST00000637225 1043 ntBASIC20.24■□□□□ 0.83
COL11A1P12107 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL11A1P12107 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A1P12107 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
COL11A1P12107 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.24■□□□□ 0.83
COL11A1P12107 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A1P12107 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COL11A1P12107 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.23■□□□□ 0.83
COL11A1P12107 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.23■□□□□ 0.83
COL11A1P12107 STK19B-204ENST00000512515 211 ntBASIC20.23■□□□□ 0.83
COL11A1P12107 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.23■□□□□ 0.83
COL11A1P12107 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.23■□□□□ 0.83
COL11A1P12107 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
COL11A1P12107 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
COL11A1P12107 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL11A1P12107 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 AC098818.2-201ENST00000564925 2320 ntBASIC20.23■□□□□ 0.83
COL11A1P12107 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.23■□□□□ 0.83
COL11A1P12107 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
COL11A1P12107 CRYGEP-201ENST00000412192 528 ntBASIC20.23■□□□□ 0.83
COL11A1P12107 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.23■□□□□ 0.83
COL11A1P12107 KRT18P2-201ENST00000447938 1258 ntBASIC20.23■□□□□ 0.83
COL11A1P12107 DNAJB3-202ENST00000449667 1266 ntBASIC20.23■□□□□ 0.83
COL11A1P12107 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.23■□□□□ 0.83
COL11A1P12107 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A1P12107 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COL11A1P12107 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL11A1P12107 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A1P12107 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A1P12107 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms