Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.51■□□□□ 0.39
PCNAP12004 KRT18P57-201ENST00000443599 1254 ntBASIC17.51■□□□□ 0.39
PCNAP12004 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.51■□□□□ 0.39
PCNAP12004 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCNAP12004 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.51■□□□□ 0.39
PCNAP12004 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.51■□□□□ 0.39
PCNAP12004 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.51■□□□□ 0.39
PCNAP12004 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.51■□□□□ 0.39
PCNAP12004 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.5■□□□□ 0.39
PCNAP12004 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.5■□□□□ 0.39
PCNAP12004 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
PCNAP12004 LINC01023-201ENST00000606054 436 ntBASIC17.5■□□□□ 0.39
PCNAP12004 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.5■□□□□ 0.39
PCNAP12004 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCNAP12004 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCNAP12004 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCNAP12004 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNAP12004 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCNAP12004 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.49■□□□□ 0.39
PCNAP12004 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCNAP12004 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCNAP12004 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 AL441883.1-201ENST00000566170 1045 ntBASIC17.49■□□□□ 0.39
PCNAP12004 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.49■□□□□ 0.39
PCNAP12004 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 AC139887.4-201ENST00000607877 719 ntBASIC17.49■□□□□ 0.39
PCNAP12004 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 AL031432.5-201ENST00000641059 760 ntBASIC17.49■□□□□ 0.39
PCNAP12004 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNAP12004 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNAP12004 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNAP12004 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNAP12004 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNAP12004 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.48■□□□□ 0.39
PCNAP12004 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.48■□□□□ 0.39
PCNAP12004 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.48■□□□□ 0.39
PCNAP12004 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNAP12004 FLJ13224-201ENST00000313737 1514 ntBASIC17.48■□□□□ 0.39
PCNAP12004 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCNAP12004 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNAP12004 AC093010.1-201ENST00000473625 1624 ntBASIC17.48■□□□□ 0.39
PCNAP12004 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.48■□□□□ 0.39
PCNAP12004 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCNAP12004 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms