Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.06■□□□□ 0.96
TOP1P11387 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TOP1P11387 AL354751.1-201ENST00000412768 1863 ntBASIC21.06■□□□□ 0.96
TOP1P11387 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TOP1P11387 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.05■□□□□ 0.96
TOP1P11387 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.05■□□□□ 0.96
TOP1P11387 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TOP1P11387 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.05■□□□□ 0.96
TOP1P11387 AC112698.1-201ENST00000510299 916 ntBASIC21.05■□□□□ 0.96
TOP1P11387 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 AC005336.2-201ENST00000593183 939 ntBASIC21.05■□□□□ 0.96
TOP1P11387 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.05■□□□□ 0.96
TOP1P11387 AC135776.1-201ENST00000319817 2481 ntBASIC21.05■□□□□ 0.96
TOP1P11387 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TOP1P11387 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOP1P11387 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.05■□□□□ 0.96
TOP1P11387 AL096828.2-201ENST00000567259 1965 ntBASIC21.05■□□□□ 0.96
TOP1P11387 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TOP1P11387 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.04■□□□□ 0.96
TOP1P11387 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.04■□□□□ 0.96
TOP1P11387 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TOP1P11387 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.04■□□□□ 0.96
TOP1P11387 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.04■□□□□ 0.96
TOP1P11387 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TOP1P11387 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.04■□□□□ 0.96
TOP1P11387 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.04■□□□□ 0.96
TOP1P11387 MINOS1P3-201ENST00000457048 203 ntBASIC21.04■□□□□ 0.96
TOP1P11387 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.04■□□□□ 0.96
TOP1P11387 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.04■□□□□ 0.96
TOP1P11387 AC138894.3-201ENST00000603787 634 ntBASIC21.04■□□□□ 0.96
TOP1P11387 AL121772.3-201ENST00000610840 674 ntBASIC21.04■□□□□ 0.96
TOP1P11387 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.04■□□□□ 0.96
TOP1P11387 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TOP1P11387 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.04■□□□□ 0.96
TOP1P11387 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.04■□□□□ 0.96
TOP1P11387 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.04■□□□□ 0.96
TOP1P11387 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TOP1P11387 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOP1P11387 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TOP1P11387 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.03■□□□□ 0.96
TOP1P11387 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.03■□□□□ 0.96
TOP1P11387 DUTP2-201ENST00000519164 463 ntBASIC21.03■□□□□ 0.96
TOP1P11387 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
TOP1P11387 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.03■□□□□ 0.96
TOP1P11387 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.03■□□□□ 0.96
TOP1P11387 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TOP1P11387 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TOP1P11387 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOP1P11387 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.03■□□□□ 0.96
TOP1P11387 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TOP1P11387 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms