Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.56■□□□□ 0.4
SP9P0CG40 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.56■□□□□ 0.4
SP9P0CG40 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP9P0CG40 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP9P0CG40 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.56■□□□□ 0.4
SP9P0CG40 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.56■□□□□ 0.4
SP9P0CG40 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP9P0CG40 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP9P0CG40 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.56■□□□□ 0.4
SP9P0CG40 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SP9P0CG40 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SP9P0CG40 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SP9P0CG40 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.55■□□□□ 0.4
SP9P0CG40 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SP9P0CG40 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SP9P0CG40 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 AC055876.3-201ENST00000431496 288 ntBASIC17.55■□□□□ 0.4
SP9P0CG40 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.55■□□□□ 0.4
SP9P0CG40 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.55■□□□□ 0.4
SP9P0CG40 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
SP9P0CG40 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.55■□□□□ 0.4
SP9P0CG40 AL353135.1-201ENST00000606729 504 ntBASIC17.55■□□□□ 0.4
SP9P0CG40 AC138649.4-201ENST00000612222 287 ntBASIC17.55■□□□□ 0.4
SP9P0CG40 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.55■□□□□ 0.4
SP9P0CG40 AC009093.7-201ENST00000623853 1223 ntBASIC17.55■□□□□ 0.4
SP9P0CG40 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.55■□□□□ 0.4
SP9P0CG40 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP9P0CG40 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.55■□□□□ 0.4
SP9P0CG40 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.54■□□□□ 0.4
SP9P0CG40 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.54■□□□□ 0.4
SP9P0CG40 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
SP9P0CG40 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 TFAMP1-201ENST00000412727 736 ntBASIC17.54■□□□□ 0.4
SP9P0CG40 AL627223.1-201ENST00000416693 442 ntBASIC17.54■□□□□ 0.4
SP9P0CG40 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.54■□□□□ 0.4
SP9P0CG40 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.54■□□□□ 0.4
SP9P0CG40 AL008721.1-201ENST00000609964 604 ntBASIC17.54■□□□□ 0.4
SP9P0CG40 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.54■□□□□ 0.4
SP9P0CG40 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SP9P0CG40 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP9P0CG40 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SP9P0CG40 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 AL049757.1-201ENST00000616842 1596 ntBASIC17.53■□□□□ 0.4
SP9P0CG40 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.53■□□□□ 0.4
SP9P0CG40 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SP9P0CG40 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.53■□□□□ 0.4
SP9P0CG40 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.53■□□□□ 0.4
SP9P0CG40 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.53■□□□□ 0.4
SP9P0CG40 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.53■□□□□ 0.4
SP9P0CG40 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 AL032819.2-201ENST00000624543 2162 ntBASIC17.53■□□□□ 0.4
SP9P0CG40 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.53■□□□□ 0.4
SP9P0CG40 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP9P0CG40 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SP9P0CG40 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SP9P0CG40 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SP9P0CG40 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms