Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CD48P09326 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.6■□□□□ 0.57
CD48P09326 IGHGP-201ENST00000390555 1178 ntBASIC18.6■□□□□ 0.57
CD48P09326 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.6■□□□□ 0.57
CD48P09326 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.6■□□□□ 0.57
CD48P09326 KRT18P65-201ENST00000439811 1286 ntBASIC18.6■□□□□ 0.57
CD48P09326 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 AP003733.1-201ENST00000491725 852 ntBASIC18.6■□□□□ 0.57
CD48P09326 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.6■□□□□ 0.57
CD48P09326 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.6■□□□□ 0.57
CD48P09326 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.6■□□□□ 0.57
CD48P09326 ZNF444P1-201ENST00000559497 298 ntBASIC18.6■□□□□ 0.57
CD48P09326 RNF126P1-202ENST00000569893 925 ntBASIC18.6■□□□□ 0.57
CD48P09326 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.6■□□□□ 0.57
CD48P09326 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.6■□□□□ 0.57
CD48P09326 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CD48P09326 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CD48P09326 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CD48P09326 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.6■□□□□ 0.57
CD48P09326 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CD48P09326 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD48P09326 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.59■□□□□ 0.57
CD48P09326 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 AC022898.2-201ENST00000616822 1312 ntBASIC18.59■□□□□ 0.57
CD48P09326 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.59■□□□□ 0.57
CD48P09326 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.59■□□□□ 0.57
CD48P09326 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.59■□□□□ 0.57
CD48P09326 KRT18P21-201ENST00000515767 1272 ntBASIC18.59■□□□□ 0.57
CD48P09326 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.59■□□□□ 0.57
CD48P09326 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.59■□□□□ 0.57
CD48P09326 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD48P09326 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD48P09326 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CD48P09326 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.58■□□□□ 0.57
CD48P09326 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD48P09326 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.58■□□□□ 0.57
CD48P09326 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD48P09326 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD48P09326 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CD48P09326 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.58■□□□□ 0.56
CD48P09326 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.58■□□□□ 0.56
CD48P09326 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.58■□□□□ 0.56
CD48P09326 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.58■□□□□ 0.56
CD48P09326 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.58■□□□□ 0.56
CD48P09326 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD48P09326 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CD48P09326 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 AC139713.2-201ENST00000641328 2723 ntBASIC18.57■□□□□ 0.56
CD48P09326 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms