Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CYP3A4P08684 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 EMBP1-201ENST00000458200 901 ntBASIC20.14■□□□□ 0.81
CYP3A4P08684 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.14■□□□□ 0.81
CYP3A4P08684 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.14■□□□□ 0.81
CYP3A4P08684 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP3A4P08684 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.14■□□□□ 0.81
CYP3A4P08684 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CYP3A4P08684 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.13■□□□□ 0.81
CYP3A4P08684 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 TPM4P1-201ENST00000436100 807 ntBASIC20.13■□□□□ 0.81
CYP3A4P08684 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.13■□□□□ 0.81
CYP3A4P08684 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.13■□□□□ 0.81
CYP3A4P08684 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.13■□□□□ 0.81
CYP3A4P08684 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.13■□□□□ 0.81
CYP3A4P08684 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP3A4P08684 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP3A4P08684 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP3A4P08684 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.12■□□□□ 0.81
CYP3A4P08684 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP3A4P08684 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP3A4P08684 FAAHP1-202ENST00000446499 1238 ntBASIC20.12■□□□□ 0.81
CYP3A4P08684 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.12■□□□□ 0.81
CYP3A4P08684 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CYP3A4P08684 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.12■□□□□ 0.81
CYP3A4P08684 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.12■□□□□ 0.81
CYP3A4P08684 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP3A4P08684 BX276092.7-203ENST00000637198 1536 ntBASIC20.12■□□□□ 0.81
CYP3A4P08684 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP3A4P08684 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 AC004870.1-201ENST00000315132 882 ntBASIC20.11■□□□□ 0.81
CYP3A4P08684 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.11■□□□□ 0.81
CYP3A4P08684 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 AC103564.2-201ENST00000432853 1299 ntBASIC20.11■□□□□ 0.81
CYP3A4P08684 ABCD1P5-201ENST00000445663 754 ntBASIC20.11■□□□□ 0.81
CYP3A4P08684 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 SAPCD2P3-201ENST00000455031 850 ntBASIC20.11■□□□□ 0.81
CYP3A4P08684 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.11■□□□□ 0.81
CYP3A4P08684 AC106795.1-205ENST00000512851 1056 ntBASIC20.11■□□□□ 0.81
CYP3A4P08684 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CYP3A4P08684 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP3A4P08684 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP3A4P08684 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms