Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A2P08572 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A2P08572 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL4A2P08572 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A2P08572 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A2P08572 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A2P08572 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A2P08572 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL4A2P08572 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A2P08572 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A2P08572 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A2P08572 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
COL4A2P08572 AC073592.3-201ENST00000625118 1834 ntBASIC17.93■□□□□ 0.46
COL4A2P08572 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A2P08572 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.93■□□□□ 0.46
COL4A2P08572 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A2P08572 AC009336.1-201ENST00000608941 1553 ntBASIC17.93■□□□□ 0.46
COL4A2P08572 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A2P08572 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 COX5BP2-201ENST00000392354 334 ntBASIC17.92■□□□□ 0.46
COL4A2P08572 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A2P08572 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.92■□□□□ 0.46
COL4A2P08572 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A2P08572 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 DUTP2-201ENST00000519164 463 ntBASIC17.92■□□□□ 0.46
COL4A2P08572 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A2P08572 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 AC109462.3-201ENST00000573934 613 ntBASIC17.92■□□□□ 0.46
COL4A2P08572 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 AC018445.3-201ENST00000624177 1945 ntBASIC17.92■□□□□ 0.46
COL4A2P08572 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 PRSS29P-201ENST00000440800 595 ntBASIC17.92■□□□□ 0.46
COL4A2P08572 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 OR7E47P-204ENST00000575924 449 ntBASIC17.92■□□□□ 0.46
COL4A2P08572 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL4A2P08572 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A2P08572 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
COL4A2P08572 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL4A2P08572 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL4A2P08572 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
COL4A2P08572 VN2R19P-201ENST00000442399 1052 ntBASIC17.91■□□□□ 0.46
COL4A2P08572 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL4A2P08572 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 AC100803.2-201ENST00000562459 1963 ntBASIC17.91■□□□□ 0.46
COL4A2P08572 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL4A2P08572 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.91■□□□□ 0.46
COL4A2P08572 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL4A2P08572 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A2P08572 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A2P08572 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A2P08572 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A2P08572 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A2P08572 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A2P08572 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
COL4A2P08572 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A2P08572 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms