Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RETP07949 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RETP07949 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RETP07949 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.08■□□□□ 0.48
RETP07949 OR7E14P-202ENST00000530490 1290 ntBASIC18.08■□□□□ 0.48
RETP07949 AC002347.1-201ENST00000569543 541 ntBASIC18.08■□□□□ 0.48
RETP07949 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.08■□□□□ 0.48
RETP07949 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.08■□□□□ 0.48
RETP07949 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.08■□□□□ 0.48
RETP07949 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.08■□□□□ 0.48
RETP07949 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.08■□□□□ 0.48
RETP07949 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.08■□□□□ 0.48
RETP07949 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.08■□□□□ 0.48
RETP07949 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RETP07949 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RETP07949 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RETP07949 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.07■□□□□ 0.48
RETP07949 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.07■□□□□ 0.48
RETP07949 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.07■□□□□ 0.48
RETP07949 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.07■□□□□ 0.48
RETP07949 AC009533.2-201ENST00000543664 586 ntBASIC18.07■□□□□ 0.48
RETP07949 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.07■□□□□ 0.48
RETP07949 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RETP07949 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.07■□□□□ 0.48
RETP07949 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.07■□□□□ 0.48
RETP07949 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RETP07949 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RETP07949 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 KRT18P28-201ENST00000453838 1332 ntBASIC18.06■□□□□ 0.48
RETP07949 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 HTR5BP-201ENST00000430851 1154 ntBASIC18.06■□□□□ 0.48
RETP07949 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.06■□□□□ 0.48
RETP07949 SART3-203ENST00000546611 1184 ntBASIC18.06■□□□□ 0.48
RETP07949 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RETP07949 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 MTDHP5-201ENST00000598980 586 ntBASIC18.06■□□□□ 0.48
RETP07949 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 IRX1P1-201ENST00000438849 1838 ntBASIC18.06■□□□□ 0.48
RETP07949 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RETP07949 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RETP07949 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 BICD1-207ENST00000551848 1962 ntBASIC18.06■□□□□ 0.48
RETP07949 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 AP005117.1-201ENST00000584346 1413 ntBASIC18.06■□□□□ 0.48
RETP07949 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
RETP07949 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RETP07949 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
RETP07949 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RETP07949 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RETP07949 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RETP07949 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RETP07949 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.05■□□□□ 0.48
RETP07949 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RETP07949 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms