Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CTSDP07339 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CTSDP07339 FSCN1P1-201ENST00000568912 1481 ntBASIC14.91□□□□□ -0.02
CTSDP07339 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.91□□□□□ -0.02
CTSDP07339 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.91□□□□□ -0.02
CTSDP07339 KRT18P23-201ENST00000435622 1283 ntBASIC14.91□□□□□ -0.02
CTSDP07339 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.91□□□□□ -0.02
CTSDP07339 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.91□□□□□ -0.02
CTSDP07339 MIR4651-201ENST00000582622 73 ntBASIC14.91□□□□□ -0.02
CTSDP07339 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 AC100803.2-201ENST00000562459 1963 ntBASIC14.91□□□□□ -0.02
CTSDP07339 AC022898.2-201ENST00000616822 1312 ntBASIC14.91□□□□□ -0.02
CTSDP07339 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 CA15P1-201ENST00000481698 905 ntBASIC14.9□□□□□ -0.02
CTSDP07339 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.9□□□□□ -0.02
CTSDP07339 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.9□□□□□ -0.02
CTSDP07339 AC073195.1-201ENST00000607241 877 ntBASIC14.9□□□□□ -0.02
CTSDP07339 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.9□□□□□ -0.02
CTSDP07339 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTSDP07339 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CTSDP07339 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CTSDP07339 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.89□□□□□ -0.03
CTSDP07339 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.89□□□□□ -0.03
CTSDP07339 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 FAM201B-201ENST00000458407 597 ntBASIC14.89□□□□□ -0.03
CTSDP07339 RN7SL471P-201ENST00000580476 299 ntBASIC14.89□□□□□ -0.03
CTSDP07339 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.89□□□□□ -0.03
CTSDP07339 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms