Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC133681.1-201ENST00000465482 601 ntBASIC15.1■□□□□ 0.01
CD74P04233 AC011506.1-201ENST00000474329 610 ntBASIC15.1■□□□□ 0.01
CD74P04233 AC090192.1-201ENST00000517740 490 ntBASIC15.1■□□□□ 0.01
CD74P04233 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.1■□□□□ 0.01
CD74P04233 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CD74P04233 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.1■□□□□ 0.01
CD74P04233 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.1■□□□□ 0.01
CD74P04233 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.1■□□□□ 0.01
CD74P04233 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.1■□□□□ 0.01
CD74P04233 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CD74P04233 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.1■□□□□ 0.01
CD74P04233 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CD74P04233 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD74P04233 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CD74P04233 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.09■□□□□ 0.01
CD74P04233 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.09■□□□□ 0.01
CD74P04233 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.09■□□□□ 0.01
CD74P04233 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.09■□□□□ 0.01
CD74P04233 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 AC009065.1-201ENST00000564055 1225 ntBASIC15.09■□□□□ 0.01
CD74P04233 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 AC233263.1-201ENST00000578059 224 ntBASIC15.09■□□□□ 0.01
CD74P04233 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.09■□□□□ 0.01
CD74P04233 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 AC022898.2-201ENST00000616822 1312 ntBASIC15.09■□□□□ 0.01
CD74P04233 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CD74P04233 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CD74P04233 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CD74P04233 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD74P04233 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.09■□□□□ 0.01
CD74P04233 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CD74P04233 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD74P04233 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.08■□□□□ 0.01
CD74P04233 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD74P04233 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.08■□□□□ 0.01
CD74P04233 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.08■□□□□ 0
CD74P04233 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CD74P04233 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.08■□□□□ 0
CD74P04233 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.08■□□□□ 0
CD74P04233 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.08■□□□□ 0
CD74P04233 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.08■□□□□ 0
CD74P04233 B3GAT3P1-201ENST00000471720 806 ntBASIC15.08■□□□□ 0
CD74P04233 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.08■□□□□ 0
CD74P04233 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.08■□□□□ 0
CD74P04233 AP000692.2-201ENST00000608391 879 ntBASIC15.08■□□□□ 0
CD74P04233 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.08■□□□□ 0
CD74P04233 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.08■□□□□ 0
CD74P04233 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.08■□□□□ 0
CD74P04233 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CD74P04233 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms