Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-ND1P03886 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.97■□□□□ 0.31
MT-ND1P03886 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-ND1P03886 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-ND1P03886 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MT-ND1P03886 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MT-ND1P03886 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 AC093010.1-201ENST00000473625 1624 ntBASIC16.96■□□□□ 0.31
MT-ND1P03886 AC034236.2-201ENST00000606662 1610 ntBASIC16.96■□□□□ 0.31
MT-ND1P03886 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-ND1P03886 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 MESTP1-201ENST00000404287 994 ntBASIC16.96■□□□□ 0.31
MT-ND1P03886 FAM197Y1-201ENST00000421178 764 ntBASIC16.96■□□□□ 0.31
MT-ND1P03886 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.96■□□□□ 0.31
MT-ND1P03886 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.96■□□□□ 0.31
MT-ND1P03886 CD177P1-201ENST00000606252 935 ntBASIC16.96■□□□□ 0.31
MT-ND1P03886 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MT-ND1P03886 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-ND1P03886 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND1P03886 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
MT-ND1P03886 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.96■□□□□ 0.3
MT-ND1P03886 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
MT-ND1P03886 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MT-ND1P03886 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND1P03886 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND1P03886 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.95■□□□□ 0.3
MT-ND1P03886 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 MCCD1P1-208ENST00000445732 328 ntBASIC16.95■□□□□ 0.3
MT-ND1P03886 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.95■□□□□ 0.3
MT-ND1P03886 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND1P03886 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 CROCCP1-201ENST00000426910 5675 ntBASIC16.95■□□□□ 0.3
MT-ND1P03886 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
MT-ND1P03886 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND1P03886 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND1P03886 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MT-ND1P03886 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-ND1P03886 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-ND1P03886 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.94■□□□□ 0.3
MT-ND1P03886 AC142381.4-202ENST00000563973 229 ntBASIC16.94■□□□□ 0.3
MT-ND1P03886 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND1P03886 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-ND1P03886 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND1P03886 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND1P03886 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-ND1P03886 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND1P03886 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND1P03886 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND1P03886 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND1P03886 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 AC009102.3-201ENST00000623118 1491 ntBASIC16.93■□□□□ 0.3
MT-ND1P03886 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms