Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TNFP01375 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFP01375 AC093503.3-201ENST00000624917 2352 ntBASIC17.48■□□□□ 0.39
TNFP01375 TNXA-203ENST00000507684 2038 ntBASIC17.48■□□□□ 0.39
TNFP01375 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TNFP01375 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TNFP01375 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.48■□□□□ 0.39
TNFP01375 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFP01375 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.48■□□□□ 0.39
TNFP01375 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 KRT8P47-201ENST00000604727 1398 ntBASIC17.48■□□□□ 0.39
TNFP01375 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
TNFP01375 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TNFP01375 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TNFP01375 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TNFP01375 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 AC093677.2-201ENST00000600169 1863 ntBASIC17.48■□□□□ 0.39
TNFP01375 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFP01375 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFP01375 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 RPS2P28-201ENST00000314255 741 ntBASIC17.47■□□□□ 0.39
TNFP01375 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 AL022342.1-201ENST00000400363 863 ntBASIC17.47■□□□□ 0.39
TNFP01375 AL590627.1-203ENST00000421194 1026 ntBASIC17.47■□□□□ 0.39
TNFP01375 AP000347.1-202ENST00000435868 847 ntBASIC17.47■□□□□ 0.39
TNFP01375 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TNFP01375 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFP01375 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFP01375 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 BX640515.1-201ENST00000617215 977 ntBASIC17.47■□□□□ 0.39
TNFP01375 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFP01375 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TNFP01375 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 AL356309.3-201ENST00000624132 1934 ntBASIC17.47■□□□□ 0.39
TNFP01375 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TNFP01375 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFP01375 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TNFP01375 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TNFP01375 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TNFP01375 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFP01375 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TNFP01375 AC122714.2-201ENST00000502787 707 ntBASIC17.46■□□□□ 0.39
TNFP01375 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TNFP01375 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.46■□□□□ 0.39
TNFP01375 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFP01375 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFP01375 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFP01375 AC120114.3-201ENST00000611923 658 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms