Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 KRT126P-201ENST00000549467 1181 ntBASIC18.38■□□□□ 0.53
MT-CO1P00395 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.38■□□□□ 0.53
MT-CO1P00395 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-CO1P00395 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-CO1P00395 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
MT-CO1P00395 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.38■□□□□ 0.53
MT-CO1P00395 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-CO1P00395 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 BICD1-207ENST00000551848 1962 ntBASIC18.38■□□□□ 0.53
MT-CO1P00395 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-CO1P00395 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
MT-CO1P00395 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.37■□□□□ 0.53
MT-CO1P00395 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-CO1P00395 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-CO1P00395 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.37■□□□□ 0.53
MT-CO1P00395 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.37■□□□□ 0.53
MT-CO1P00395 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 AL353801.3-201ENST00000609898 542 ntBASIC18.37■□□□□ 0.53
MT-CO1P00395 AC009154.2-201ENST00000621177 724 ntBASIC18.37■□□□□ 0.53
MT-CO1P00395 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-CO1P00395 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.37■□□□□ 0.53
MT-CO1P00395 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-CO1P00395 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-CO1P00395 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-CO1P00395 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-CO1P00395 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MT-CO1P00395 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 AL354751.1-201ENST00000412768 1863 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 IGHV3-47-201ENST00000425060 335 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 KRT17P6-201ENST00000453795 1220 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 AC074051.2-201ENST00000565115 352 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 AC012615.1-201ENST00000565797 1299 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 AC011840.4-201ENST00000578471 627 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MT-CO1P00395 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.36■□□□□ 0.53
MT-CO1P00395 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-CO1P00395 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-CO1P00395 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms