Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 AC106886.4-201ENST00000623557 2502 ntBASIC20.59■□□□□ 0.89
MBD3O95983 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 KRT18P23-201ENST00000435622 1283 ntBASIC20.59■□□□□ 0.89
MBD3O95983 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 LINC01451-201ENST00000623792 534 ntBASIC20.59■□□□□ 0.89
MBD3O95983 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.59■□□□□ 0.89
MBD3O95983 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MBD3O95983 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
MBD3O95983 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.58■□□□□ 0.89
MBD3O95983 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
MBD3O95983 AC022898.2-201ENST00000616822 1312 ntBASIC20.58■□□□□ 0.89
MBD3O95983 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MBD3O95983 FSCN1P1-201ENST00000568912 1481 ntBASIC20.58■□□□□ 0.89
MBD3O95983 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
MBD3O95983 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MBD3O95983 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.58■□□□□ 0.89
MBD3O95983 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.58■□□□□ 0.89
MBD3O95983 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.58■□□□□ 0.89
MBD3O95983 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.58■□□□□ 0.89
MBD3O95983 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.58■□□□□ 0.89
MBD3O95983 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3O95983 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MBD3O95983 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MBD3O95983 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.58■□□□□ 0.88
MBD3O95983 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
MBD3O95983 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
MBD3O95983 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MBD3O95983 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.58■□□□□ 0.88
MBD3O95983 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MBD3O95983 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
MBD3O95983 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MBD3O95983 CA15P1-201ENST00000481698 905 ntBASIC20.57■□□□□ 0.88
MBD3O95983 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.57■□□□□ 0.88
MBD3O95983 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.57■□□□□ 0.88
MBD3O95983 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.57■□□□□ 0.88
MBD3O95983 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.57■□□□□ 0.88
MBD3O95983 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MBD3O95983 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.57■□□□□ 0.88
MBD3O95983 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
MBD3O95983 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
MBD3O95983 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MBD3O95983 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.56■□□□□ 0.88
MBD3O95983 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.56■□□□□ 0.88
MBD3O95983 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 AGGF1P2-201ENST00000426656 2106 ntBASIC20.56■□□□□ 0.88
MBD3O95983 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
MBD3O95983 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MBD3O95983 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MBD3O95983 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MBD3O95983 MESTP1-201ENST00000404287 994 ntBASIC20.56■□□□□ 0.88
MBD3O95983 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD3O95983 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.56■□□□□ 0.88
MBD3O95983 AC073195.1-201ENST00000607241 877 ntBASIC20.56■□□□□ 0.88
MBD3O95983 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MBD3O95983 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.56■□□□□ 0.88
MBD3O95983 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3O95983 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms