Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CBX6O95503 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CBX6O95503 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CBX6O95503 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX6O95503 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX6O95503 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CBX6O95503 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.91■□□□□ 0.46
CBX6O95503 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 AC010203.1-204ENST00000548782 407 ntBASIC17.91■□□□□ 0.46
CBX6O95503 AL160286.2-201ENST00000567150 934 ntBASIC17.91■□□□□ 0.46
CBX6O95503 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.91■□□□□ 0.46
CBX6O95503 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.91■□□□□ 0.46
CBX6O95503 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
CBX6O95503 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CBX6O95503 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
CBX6O95503 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 MYLKP1-201ENST00000509077 1580 ntBASIC17.91■□□□□ 0.46
CBX6O95503 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.91■□□□□ 0.46
CBX6O95503 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
CBX6O95503 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX6O95503 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CBX6O95503 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CBX6O95503 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CBX6O95503 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CBX6O95503 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.9■□□□□ 0.46
CBX6O95503 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.9■□□□□ 0.46
CBX6O95503 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 WWOX-216ENST00000569818 525 ntBASIC17.9■□□□□ 0.46
CBX6O95503 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.9■□□□□ 0.46
CBX6O95503 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CBX6O95503 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.9■□□□□ 0.46
CBX6O95503 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CBX6O95503 CICP6-201ENST00000457191 2729 ntBASIC17.9■□□□□ 0.46
CBX6O95503 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX6O95503 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.89■□□□□ 0.46
CBX6O95503 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CBX6O95503 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CBX6O95503 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
CBX6O95503 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.89■□□□□ 0.45
CBX6O95503 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CBX6O95503 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX6O95503 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX6O95503 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 LIN28AP1-201ENST00000429574 405 ntBASIC17.89■□□□□ 0.45
CBX6O95503 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX6O95503 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.89■□□□□ 0.45
CBX6O95503 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CBX6O95503 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CBX6O95503 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.89■□□□□ 0.45
CBX6O95503 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX6O95503 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CBX6O95503 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms