Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH8O95206 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDH8O95206 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDH8O95206 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.89■□□□□ 0.46
PCDH8O95206 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.89■□□□□ 0.46
PCDH8O95206 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.89■□□□□ 0.46
PCDH8O95206 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.89■□□□□ 0.46
PCDH8O95206 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDH8O95206 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PCDH8O95206 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCDH8O95206 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDH8O95206 AL662844.1-201ENST00000546340 181 ntBASIC17.89■□□□□ 0.45
PCDH8O95206 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDH8O95206 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 AC008608.2-201ENST00000606089 416 ntBASIC17.89■□□□□ 0.45
PCDH8O95206 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH8O95206 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDH8O95206 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 AC093010.1-201ENST00000473625 1624 ntBASIC17.89■□□□□ 0.45
PCDH8O95206 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH8O95206 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDH8O95206 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH8O95206 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH8O95206 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDH8O95206 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
PCDH8O95206 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 OR6D1P-202ENST00000641007 5290 ntBASIC17.88■□□□□ 0.45
PCDH8O95206 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.88■□□□□ 0.45
PCDH8O95206 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 INTS4P1-201ENST00000438455 1935 ntBASIC17.88■□□□□ 0.45
PCDH8O95206 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PCDH8O95206 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH8O95206 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCDH8O95206 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDH8O95206 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC011467.2-201ENST00000598425 242 ntBASIC17.88■□□□□ 0.45
PCDH8O95206 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC022898.2-201ENST00000616822 1312 ntBASIC17.88■□□□□ 0.45
PCDH8O95206 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH8O95206 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 AL020996.1-203ENST00000536896 2307 ntBASIC17.88■□□□□ 0.45
PCDH8O95206 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH8O95206 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH8O95206 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH8O95206 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH8O95206 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms