Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 AL391005.1-201ENST00000623953 2435 ntBASIC14.74□□□□□ -0.05
SCAF4O95104 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAF4O95104 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAF4O95104 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAF4O95104 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAF4O95104 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 AC093827.2-201ENST00000512654 315 ntBASIC14.73□□□□□ -0.05
SCAF4O95104 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAF4O95104 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SCAF4O95104 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAF4O95104 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAF4O95104 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.72□□□□□ -0.05
SCAF4O95104 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SCAF4O95104 AC008550.1-201ENST00000511500 884 ntBASIC14.72□□□□□ -0.05
SCAF4O95104 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.72□□□□□ -0.05
SCAF4O95104 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.72□□□□□ -0.05
SCAF4O95104 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.72□□□□□ -0.05
SCAF4O95104 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.72□□□□□ -0.05
SCAF4O95104 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCAF4O95104 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.72□□□□□ -0.05
SCAF4O95104 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms