Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.56■□□□□ 0.24
NKX2-2O95096 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX2-2O95096 GUSBP12-201ENST00000513727 720 ntBASIC16.56■□□□□ 0.24
NKX2-2O95096 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.56■□□□□ 0.24
NKX2-2O95096 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
NKX2-2O95096 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX2-2O95096 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NKX2-2O95096 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 AC009949.1-201ENST00000623048 1830 ntBASIC16.56■□□□□ 0.24
NKX2-2O95096 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX2-2O95096 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 PCDHB18P-201ENST00000524813 2368 ntBASIC16.56■□□□□ 0.24
NKX2-2O95096 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 RN7SL606P-201ENST00000472779 293 ntBASIC16.55■□□□□ 0.24
NKX2-2O95096 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.55■□□□□ 0.24
NKX2-2O95096 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.55■□□□□ 0.24
NKX2-2O95096 KRT8P26-201ENST00000534154 1276 ntBASIC16.55■□□□□ 0.24
NKX2-2O95096 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
NKX2-2O95096 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX2-2O95096 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
NKX2-2O95096 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX2-2O95096 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NKX2-2O95096 AC005332.8-201ENST00000622750 2735 ntBASIC16.54■□□□□ 0.24
NKX2-2O95096 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NKX2-2O95096 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX2-2O95096 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX2-2O95096 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX2-2O95096 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NKX2-2O95096 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
NKX2-2O95096 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.54■□□□□ 0.24
NKX2-2O95096 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 AC116407.4-201ENST00000623319 1061 ntBASIC16.54■□□□□ 0.24
NKX2-2O95096 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NKX2-2O95096 LINC00896-202ENST00000609602 2128 ntBASIC16.54■□□□□ 0.24
NKX2-2O95096 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NKX2-2O95096 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX2-2O95096 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX2-2O95096 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms